PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019192568.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 340aa    MW: 37208.6 Da    PI: 5.8691
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019192568.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY992.9e-31162220259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+++ gC ++k+ver+++dp+++++tY+ eHnh+
  XP_019192568.1 162 SDMWSWRKYGQKPIKGSPYPRGYYRCSTSkGCLARKQVERNRSDPNMFIVTYTAEHNHP 220
                     79************************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MEPDWDLHAV VRGCAVTSTT AGGGGATTSP FCSFNSRQQD ENLDCSHDPF YFSSSTDNST  60
TWFNEELHDL YLPFLHRPAP PSEQPLPPQS PPPPFPVLRG LQGSLPSQFN VTATRIQANS  120
QSLFSNASST TSSNSRPQTP AGKRRKNQTK RLCQVPAEDL ASDMWSWRKY GQKPIKGSPY  180
PRGYYRCSTS KGCLARKQVE RNRSDPNMFI VTYTAEHNHP MPTHRNSLAG STRRKGTSHQ  240
TTTSGSETNR PSTSSPPPEK QESSRDEKGG VFDDEFGVSN MGMDGNAPEE EDDFFEGMAE  300
LGESLKSDDA GDSFSDNFQG AMQFQCWLPN NAATTAGGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.15e-66WRKY family protein