PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019191191.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB_related | ||||||||
Protein Properties | Length: 104aa MW: 12312.8 Da PI: 7.779 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.3 | 4.6e-10 | 40 | 78 | 4 | 44 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 ++++E++l+++ +k G + W++Ia +++ gRt++++ +w XP_019191191.1 40 MSQQEEDLIYRMHKIVGDR-WALIAGRIP-GRTAEEIERFW 78 799**************99.*********.*********99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 104 aa Download sequence |
MSKEQQQQHL QKKRSKMSSN NQSCSNTEEV SSMEWEFINM SQQEEDLIYR MHKIVGDRWA 60 LIAGRIPGRT AEEIERFWIM KHSDAFAHKR HPTSPTTHQI DQIT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46410.1 | 4e-35 | MYB_related family protein |