PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019190826.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 26257.4 Da PI: 5.4546 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.3 | 1e-19 | 125 | 175 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg++ tae+Aa a+++a+ +++g XP_019190826.1 125 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAALAYDKAAYRMRG 175 8********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 239 aa Download sequence |
MMYEDTEFMF DSAFLDSIQR FYFLDDFHTP AETQQDFCRS SSSGRSSFPC LGENWGESTV 60 PGDNSSGWMP AVAATAAATS VVKDEPEMGF NGIPGIWDFT AASPPEVEAA EPAAAAAPQE 120 VMQKHYRGVR RRPWGKFAAE IRDPAKNGAR VWLGTYETAE DAALAYDKAA YRMRGSRALL 180 NFPLRINSGE PEPVRITAKK RLPSPENCSP SSSVTCEDGC PKRRKKLSKA TEPGRVISN |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 221 | 227 | PKRRKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G47220.1 | 5e-38 | ERF family protein |