PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019190744.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 271aa    MW: 30456.7 Da    PI: 9.4343
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019190744.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.4e-18170221256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +++GVr+++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g+
  XP_019190744.1 170 HFRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAAVAYDRAAYRMRGA 221
                     79*******.***********9987..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MEASKPIQYP FMFECYQFFI LSIVKALNVF TFNRINTSFT LFGSSLLFAI SIFNKKIGKQ  60
ESLVGKNVVL LKMMFGNAEV MPDFALLEYI RRHLLDDFDS PVASVTDYNY SPDSNFSGGS  120
GWSSPVDETP TSVVKEEPEM AFYDFPAILD FTPVPPPAVE VARPAAVEKH FRGVRRRPWG  180
KFAAEIRDPA KNGARVWLGT YETAEDAAVA YDRAAYRMRG ARALLNFPHR INSDEPEPVR  240
IRSKKRFASM DSSSSSTSSE NVSSKRRKTA A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.13e-34ERF family protein