PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019185675.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 202aa MW: 22114.4 Da PI: 4.8839 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.5 | 3.4e-18 | 44 | 94 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y GVr ++ +g+++AeIrd + ng +r++lg+f +aeeAa a+++a+ ++g XP_019185675.1 44 HYVGVRKRP-WGKYAAEIRDSTRNG--TRVWLGTFNSAEEAALAYDQAAVLMRG 94 79*******.**********44465..**********************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MGGGGEIIKQ ESDMIFSGEV KSSEVENNGD PRENNSNKSP KEKHYVGVRK RPWGKYAAEI 60 RDSTRNGTRV WLGTFNSAEE AALAYDQAAV LMRGPSSCLN FPVERVNESL QEMGCYSSCK 120 DGWSPAEALK ERHKKRSSRG KRKQAEDGGG GGGVVGYAFR DEKAAQDCCC DGDDLPPLVF 180 EDLGPDLLDQ LLSESYTSSS YQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 8e-27 | ERF family protein |