PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019180913.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 199aa    MW: 21914 Da    PI: 9.6762
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019180913.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.11.5e-32119177159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg H h+
  XP_019180913.1 119 LDDGYRWRKYGQKAVKNNRFPRSYYRCTHQGCNVKKQVQRLSKDEGVVVTTYEGIHSHP 177
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MDAYPSMFRC SSPSPPPPPY LSLMNMMNNN SGGMESGLLG MKMMSDGGVV EVPCSSEMMK  60
SESICAAVAT TANNNNGFTE IGAAKSPPPS AAAAGKKKGE KKMKKARFAF QTRSQVDILD  120
DGYRWRKYGQ KAVKNNRFPR SYYRCTHQGC NVKKQVQRLS KDEGVVVTTY EGIHSHPIEK  180
STDNFENILS QMQIYAAAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.13e-56WRKY family protein