PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019179538.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 313aa    MW: 34068.6 Da    PI: 7.2077
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019179538.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.88.6e-21146195255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrd +     r +r++lg+f+tae Aa+a+++a+++++g
  XP_019179538.1 146 RYRGVRQRP-WGKWAAEIRDpF-----RaTRVWLGTFDTAEAAARAYDEAALRFRG 195
                     7********.**********66.....68************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MCIGKVANPR ERTRGVSEDD HHPHPHPHDV VTMRLESLVS PMFSGLDREQ EMSVMVSALT  60
DVVAGNDRRR RPHPTNDAAG EADQFLESSS VDTVCSSYHN FSIGGYSGGE SSAIIRSSEA  120
EAASFVYTPP ANSRGGGGDN NEGGRRYRGV RQRPWGKWAA EIRDPFRATR VWLGTFDTAE  180
AAARAYDEAA LRFRGSKAKL NFPENVRLLR LPPNPLPLPL PLQNPHITTT TTSSSSSPQP  240
ILHNHFSGFI NQPPSFLQQL MLSSSSSSSS SSSSSMPYAH YQSPMIYPPV SAAEYPAASS  300
WSDSAYHHPS SSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.12e-17ERF family protein