PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019177798.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 358aa    MW: 39665.8 Da    PI: 4.4481
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019177798.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.6e-20117167256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                     +++GVr+++ +g+W+AeIrdp+    r  r +lg+++taeeAa  +++a++kl+g+
  XP_019177798.1 117 KFRGVRQRP-WGKWAAEIRDPT----RgVRLWLGTYDTAEEAAMVYDNAALKLRGP 167
                     89*******.**********84....35**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MDLIEFCPIK YTEHRHVVKK LAKPSAAAAL NPGVFSTGPK RVRITVTDPD ATDTSSDEEE  60
LFERQRVRRY IHEINIETAV NVDAVKSGKK RPVAEALHSK QKQVKVAPAA AANGVRKFRG  120
VRQRPWGKWA AEIRDPTRGV RLWLGTYDTA EEAAMVYDNA ALKLRGPDAL TNFVKPPAIE  180
TPEVNAASSS GYDSGDESRH LPSPTSVLHF RTSKCSEESE PQCKSEAVHS DGSVHDCVES  240
DQAVQVPDPV QSNVADFPGD ISDDIPFIDN FFDFQSSKQT LLLDDSSPNF NFVKAEFDTT  300
SADVWLPGFG NDLFRDDGFC DDFGKFDDSF EDLSTLNVSD YFEDDVDDFS IVDTFLAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-51ERF family protein