PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019177271.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 303aa    MW: 31833 Da    PI: 6.7982
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019177271.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.69.6e-21154203255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +grW+AeIrdp   +k++r++l +f+tae Aa+a+++a+++++g
  XP_019177271.1 154 RYRGVRRRP-WGRWAAEIRDP---NKSARVWLSTFDTAEAAAEAYDQAALRFRG 203
                     7********.**********9...336************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MPNPSGDRRS SKDGDEIYEG GREAYSEMVS PLLAAGINRE REMSVMVSAL AHVVAGDDDM  60
TAGGGADGIL SLTSSLLDSV ASSGSGGLSS SSTSVCSSYH HDDFSLLGAS TLGTSSAKSG  120
GRIARTSSGP PETATFIYTP TTTHHNGQVE PGRRYRGVRR RPWGRWAAEI RDPNKSARVW  180
LSTFDTAEAA AEAYDQAALR FRGSKAKLNF PENVSLLPPS SSARVSSPAA RSPTPYSNFG  240
SPAVVNRPGE FVVQQLPVSL LEQRICSSES SSSMLPSAQP PVRFGHAGGQ SSGTEYPAAS  300
WSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.12e-13ERF family protein