PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019176871.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 207aa MW: 23883.9 Da PI: 4.5395 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 28.3 | 4.5e-09 | 55 | 104 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr + rgrW+ eI+dp+ r kr +l +++++ee +++a +l+g XP_019176871.1 55 KFRGVRKWP-RGRWALEICDPT----RgKRLWLDTYDSPEETVVVYDNASVRLKG 104 89****999.8*********83....35*************99999998877765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MLRNRVLWIV VTDSAATDYS DDEGERAVGM WRRVKRHMWG IKFVPMPPFD ACSQKFRGVR 60 KWPRGRWALE ICDPTRGKRL WLDTYDSPEE TVVVYDNASV RLKGLDAVTN FLKNTVTETA 120 VDTSLTSSNT ALSPASVLCY DDFTPFDRPV QSTFIPNEAA AVNEFKALDN LDFENFDFDF 180 YFFGLTIFPL FPTHCVHEFD EFDAENY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 7e-22 | ERF family protein |