PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019175815.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 172aa MW: 18625.1 Da PI: 9.1391 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.1 | 2.4e-19 | 73 | 124 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrd + +r++lg+f taeeAa a+++a+ +++g+ XP_019175815.1 73 RYRGVRRRP-WGKYAAEIRD----SarQGARVWLGTFNTAEEAALAYDKAAFRMRGA 124 8********.**********....33334**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MSPLVTRQLL PMAPNAHHHE LPLNENDSQE MVLYEVLNEA EALPPEATHS FLPPPRRSRG 60 GGAPLLRPIE KKRYRGVRRR PWGKYAAEIR DSARQGARVW LGTFNTAEEA ALAYDKAAFR 120 MRGAKALLNF PPDVVVAAAA AAAAASSPAL QGMRSYSCDD TGMGSSAACS NE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47220.1 | 1e-28 | ERF family protein |