PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019173781.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 241aa MW: 26341.4 Da PI: 7.3079 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.9 | 3e-19 | 5 | 55 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr++ +g+Wv+eIr+p kr++lg+f taeeAa+a+++a+ ++g XP_019173781.1 5 KKFRGVRQRQ-WGSWVSEIRHP-----LlkKRIWLGTFETAEEAARAYDQAAVLMNG 55 59*****999.**********8.....335*********************977765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MVQSKKFRGV RQRQWGSWVS EIRHPLLKKR IWLGTFETAE EAARAYDQAA VLMNGQNAKT 60 NFPAAAVAKE KSNGNGGEAT PPIPVDVLSA KLKKCCREPA PSITCLRLDT DGCHIGVWQK 120 KSGKDSGSNW LTKIELQGKK KKKKKVCATE EEEEEEERQT PSSSTTDNNA GGGGGYCNSW 180 DNIVSPSSSS SLSSSNNSLG ISSSSPDELV IADMDDENRV AMQMVEELLN WNIPNSSIHQ 240 N |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 139 | 145 | KKKKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11190.1 | 9e-49 | ERF family protein |