PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019170723.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 420aa    MW: 46198.2 Da    PI: 6.1451
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019170723.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding231.9e-0731611446
                     HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     +a + +G++ W+ Ia+ +  gRt++ +k+r+ +
   XP_019170723.1 31 EAQRIFGNR-WTEIAKVVS-GRTDNAVKNRFTT 61
                     578899***.*********.**********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    
MHQNMKKKSS STNSSESTKP KERHIVSWSQ EAQRIFGNRW TEIAKVVSGR TDNAVKNRFT  60
TLCKKRAKNE ALAKENSNSS VNRRVVFPSW LNSSDSISES AVPLKKQRRS HIPDPPESFS  120
NGEKSLVSCD ATNQMLRSPF AVIGQNLYSP GSNVSSHQND EDTKDSHANG SSNETEGTFL  180
KKDDPKILAL MQQAELLSSL ALKVNSENTN QSLENACKVL EDFLNHTKDG DVTKCQISEM  240
EIQLENFKQS ANELKSINEC SQPSWRQPAL SEESAGSSEY STGSTLLAHG VGDNREKSEA  300
ELCALHQDIE SGLQSTHIDD EFAKGISGNA SNSQVDTFPA CDKVNPVNET ICDYSNEECC  360
SPIQVTPMFR SLAAAIPSPK FSESERQFLL KTLGMESTSP NPSINPSHPP SCKRALLHSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02820.21e-101MYB family protein