PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019169018.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 280aa    MW: 30974.5 Da    PI: 7.3747
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019169018.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.4e-19127175355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++GVr+++ +g+W+AeIrdp     +  +r++lg+f taeeAa+a+++ + +++g
  XP_019169018.1 127 FRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFNTAEEAARAYDRKAIEFRG 175
                     8*******.**********7.....337************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MNRIGRRVKQ ELSSGDQGHR PPARLTGEQE FSVMVSALKN VISGRAVSAE ENVDLFSSFE  60
FLAAASAGDS STSAAELPPF LSVPEGNTCQ FCGISGCLGC NFFGPTTEAD DNQKKNKNAV  120
KKKKKNFRGV RQRPWGKWAA EIRDPHKAAR VWLGTFNTAE EAARAYDRKA IEFRGPRAKL  180
NFPFSDYTSS NPQLLQRSAS TSSSHLRRPM PPPPPPQQQE ISVTESNLAA KMEVGTSNEN  240
ELWKFGEDEI QDCWTMMMDF NGDSSDSASG YVQPWDHQSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.13e-33ERF family protein