PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019167120.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 317aa    MW: 34822.8 Da    PI: 4.8726
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019167120.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.4e-20129179155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +grW+AeIrdp+    r kr++lg+f+t+eeAa+ +++a+  l+g
  XP_019167120.1 129 KKFRGVRQRP-WGRWAAEIRDPT----RgKRVWLGTFDTPEEAAAVYDKAAVLLKG 179
                     59********.**********84....35*********************987766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MDRHSCLAMV AERVEFSDSP VTVRAPVKFS EHWVASKKKQ VREIGESPAR IRRKVRIVVT  60
DGDATDSSDD EEERVGRRVK RYVTEISLVP PAMPAARMEA GSPVQVGKKR GLDHGVLSSP  120
PEGDVSSRKK FRGVRQRPWG RWAAEIRDPT RGKRVWLGTF DTPEEAAAVY DKAAVLLKGA  180
DAVTNFPKVT VPETAVEGPK DVVDAALSPT SVFRFDDVTP SNSQPSIDVS TNDTSAKSDV  240
STNDIPESSD VSANDAALSP TSVLRFDGFT AFDNLPLVDL DSFGFDFDFS FHSPGFDKHI  300
ADEFGEFNFD DFALEVR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15056RIRRKVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.17e-41ERF family protein