PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019166004.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 267aa    MW: 29554.2 Da    PI: 8.9672
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019166004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.12.9e-20121170255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+W+AeIrdp+    +  r++lg+f taeeAa+a+++a+ +++g
  XP_019166004.1 121 NYRGVRQRP-WGKWAAEIRDPR----KaVRVWLGTFKTAEEAARAYDRAAIEFRG 170
                     59*******.**********94....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MQWSTQILQP EPFSTAATNR PSPHPPLTAA QQEFSIMVSA LQNVINGGDA AAAATSTSTH  60
QTSCEGFAEP PPPPLLGQKC QFCKYEGCLG CNFFAAAPED ARQMAKKKKS NAVVMKRKKK  120
NYRGVRQRPW GKWAAEIRDP RKAVRVWLGT FKTAEEAARA YDRAAIEFRG PRAKLNFSFA  180
DYTNTTTSTT MAVTTSSTRQ QDVTNPSSSS TISQQPPQVV QENSENGTNW SVPAKMEVGN  240
GDQEFQEWMK MLMDFNDVSS DYILQLP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106120KKKKSNAVVMKRKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.17e-35ERF family protein