PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165745.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 246aa    MW: 26680 Da    PI: 8.1396
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165745.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.61.1e-0585107123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C+ Cg++F++   L  H+ +H
  XP_019165745.1  85 YECKTCGRTFPTFQALGAHQTSH 107
                     99******************998 PP

2zf-C2H213.30.00024165187123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg  Fs+   L  H+r+H
  XP_019165745.1 165 HECSYCGAEFSSGQVLGGHMRRH 187
                     78********************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MTPPHSSATS EPIPAAPTLE DEDMARCLML LSQGGGVSRH PPAIPKSPLY KEEESGGGSK  60
FCSKKYIEMT TVGGGGGVKV GMYVYECKTC GRTFPTFQAL GAHQTSHTKE KPPLTTVETA  120
AVKRPLSLYD EEDINPYPFN KTPKISPPFS SLHFYDSAKS SPRIHECSYC GAEFSSGQVL  180
GGHMRRHRNS TAAAAASQLS PSSSSFEKRV LQKEENNGKG LNLDLNLLPA GEDNQDHRRA  240
REPIVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.13e-31C2H2 family protein