PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165279.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 271aa    MW: 30089.7 Da    PI: 8.6202
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165279.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.97.9e-21127176255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+W+AeIrdp+    + +r++lg+f taeeAa+a+++a+ +++g
  XP_019165279.1 127 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFNTAEEAARAYDRAAIEFRG 176
                     59*******.**********94....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MQRIPKRVNK QAEVFSSSAQ APPRLTGDQE YSVMVTALKH VIDGSAAAAA MESNFDRDLH  60
FESLSAASTS TARTEVPPVF RVPEGQTCQF CEIKGCLGCN FFGAAPEIAA AAEDKRKKNA  120
GKKKKKNYRG VRQRPWGKWA AEIRDPRKAA RVWLGTFNTA EEAARAYDRA AIEFRGPRAK  180
LNFSFADYTS YAPPEQSTSS VSSSHPHPHP PQPLHLQQQQ SQHENMGFVG GTRKEKELWE  240
FAGDQDFQDL MMMMDFNADS SDSASGNLHS F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121127GKKKKKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.13e-31ERF family protein