PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019160913.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 280aa    MW: 30551.1 Da    PI: 6.1324
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019160913.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.3e-194897255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +gr++AeIrdp     +  r +lg+++taeeAa a++aa+++++g
  XP_019160913.1 48 KYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTYDTAEEAACAYDAAARNMRG 97
                    7********.**********93....35999**********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MEDAMKRVNG FTDNSSDLIP PLPKRCAATA AGSSPASRRA ASAGVIMKYR GVRRRPWGRY  60
AAEIRDPQSK ERRWLGTYDT AEEAACAYDA AARNMRGVKA RTNFIFPPFP AAFHGVVDNS  120
NFPTIVSSLI ANQTANPIMS LGDHQLPLML NDNGGTPCSS FLTEITAQKP RSLSSQSCVD  180
NACPNRSSGM EFFESQPPNS GLLGDVLNGF FPKPEAPKSE PSTPMCVDAK KSLDDQNGQF  240
AAGEIENFNS RGFDSPPSLH FNAEFPAPDD MFNYAEHFNW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.13e-26ERF family protein