PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019160911.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 314aa    MW: 33508.2 Da    PI: 8.1188
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019160911.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.9e-1952101255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +gr++AeIrdp     +  r +lg+++taeeAa a++aa+++++g
  XP_019160911.1  52 KYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTYDTAEEAACAYDAAARAMRG 101
                     8********.**********93....35999**********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MEDAIKRLNG FTDNSSSDLI PPLPKRCGGA GSSPTNRRAA ARDAGSGGGI IKYRGVRRRP  60
WGRYAAEIRD PQSKERRWLG TYDTAEEAAC AYDAAARAMR GVKARTNFVY PVSPPYPSAV  120
VNGVSIPISA SRANFPAFFP PVFSSFSSSH SNQTPNPMSL CDHQIALMLN NDNGSSFLNE  180
ISQITALQAR TGSIFNPPTT LSSSSPTSAD NNGCPNSSSG MEFFESQPPN SGLLGDVLNG  240
FFPKPQASKS EPSTSDAKKK SVDDQKGQFG ICIHDHCPPA GEFGNFNINN GFSGGLPLED  300
VFGDAGVQLS RAFW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.11e-18ERF family protein