PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019159651.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 197aa MW: 22261 Da PI: 9.6312 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.6 | 8.8e-20 | 6 | 55 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+Wv+eIr+p +r++lg+f+taeeAa+a+++a+ + g XP_019159651.1 6 KFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFDTAEEAARAYDEAAILMSG 55 89******9.**********8.....334*********************987765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MVHSRKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFDTAE EAARAYDEAA ILMSGRNAKT 60 NFPITPQDSQ ANQPNNNIHR PADSSIRSSP NPLSEILHAK LRKCSKVPSP SLTCLRLDIE 120 SSHIGVWQKR AGQPSDSKWV MTVELQKNNR GSDGGEGTKK AESVSARGMD EEERLALQMI 180 DELLHINTPT PSFEDHY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 6e-63 | ERF family protein |