PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019157794.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Nin-like

Protein Properties

Length: 696aa MW: 77694 Da PI: 5.2581

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019157794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	48.5	1.7e-15	525	569	5	49
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49 i+ + l++ F ++ dAAk+L+v+ ++LKr+CR +GI+RWP k XP_019157794.1 525 ITRQLLEQLFGKNRDDAAKTLKVSISTLKRACRDFGINRWPNHKG 569 89999************************************9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 696 aa Download sequence
MSEEAETTIV VHHLQTDCVN TDCDLLFDMT GGMVMSPQWM GFSGEEPLYL TPDMGMRGGM 60 MMSTSPPRMN YFSPPSGDSD PFILWNFADH NDAQEFENRK GMMTRPTWKQ QQPPCIEEVG 120 AARASATLAG LVERVCLPHL FILDLSSCKC LRDVRPSPSL NSLTSPSSYC KPGLPGALGV 180 TPCLLSLEWL CQNMVIELGN GEQIINVKQA AAYLQLDFSS ENNYAVCSSR ALELESWGGM 240 IMERISVSHR WRYAFCSKTQ PWNMVLEVLD VVVSLLLCLG TNNYSFGISV NDDCSFSSSS 300 VNSKMHSLLY FERTCLEMQH QNSLERQFVD HFERLVQTGV LELLSGEEIK LRYLQEEVGT 360 ASQKNHSVSI LPALLGAESR MMQLDSPCEA HNPKSNATNE GRNVVVVGLK RTDAIVSSST 420 FKRARRDFGI TRHSLEEVGT ASDENHTADI CPAVEAQYDA AGREGMLLLQ QEDSSSEAHI 480 PESSATNEER NNVVVELNNS IDANGGNSSS EKTDNISRWE KDYGITRQLL EQLFGKNRDD 540 AAKTLKVSIS TLKRACRDFG INRWPNHKGK KPNCSLNQNQ HVQAVKKHKG IQPACPALPP 600 LQPTNTSECN TTMSVKVTYK NDTIRLPLSS SSTIKYLEEQ LETKLKMSLE NMSIKYQDEE 660 DDWITLTCDS ELKHGMEVLR SCGKIIIRMM VTPKFD

Sequence ? help Back to Top

Protein Sequence Length: 696 aa Download sequence

MSEEAETTIV VHHLQTDCVN TDCDLLFDMT GGMVMSPQWM GFSGEEPLYL TPDMGMRGGM  60
MMSTSPPRMN YFSPPSGDSD PFILWNFADH NDAQEFENRK GMMTRPTWKQ QQPPCIEEVG  120
AARASATLAG LVERVCLPHL FILDLSSCKC LRDVRPSPSL NSLTSPSSYC KPGLPGALGV  180
TPCLLSLEWL CQNMVIELGN GEQIINVKQA AAYLQLDFSS ENNYAVCSSR ALELESWGGM  240
IMERISVSHR WRYAFCSKTQ PWNMVLEVLD VVVSLLLCLG TNNYSFGISV NDDCSFSSSS  300
VNSKMHSLLY FERTCLEMQH QNSLERQFVD HFERLVQTGV LELLSGEEIK LRYLQEEVGT  360
ASQKNHSVSI LPALLGAESR MMQLDSPCEA HNPKSNATNE GRNVVVVGLK RTDAIVSSST  420
FKRARRDFGI TRHSLEEVGT ASDENHTADI CPAVEAQYDA AGREGMLLLQ QEDSSSEAHI  480
PESSATNEER NNVVVELNNS IDANGGNSSS EKTDNISRWE KDYGITRQLL EQLFGKNRDD  540
AAKTLKVSIS TLKRACRDFG INRWPNHKGK KPNCSLNQNQ HVQAVKKHKG IQPACPALPP  600
LQPTNTSECN TTMSVKVTYK NDTIRLPLSS SSTIKYLEEQ LETKLKMSLE NMSIKYQDEE  660
DDWITLTCDS ELKHGMEVLR SCGKIIIRMM VTPKFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	5e-13	Nin-like family protein