PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152693.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 325aa    MW: 35372.3 Da    PI: 5.2111
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152693.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.61e-20137186255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  XP_019152693.1 137 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 186
                     59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MAATMDLWSS IGVDFHSSEP FNGGGDLMEA LEPFISASPS PSPSPSSSSD LFYGSYGSFN  60
GYSGCGVGQS GFIGLNPLTP LQVRQIQTQI DLQAQQMMGS APFQSQWPPQ QRRNLSFLAP  120
RPVPMKVAHA PPKPTKLYRG VRQRHWGKWV AEIRLPKNRT RLWLGTFDTA EEAALAYDKA  180
AYKLRGDSAR LNFPNLRHNG SLIGGDFGEY KPLHSNVDAK LQAICQSLAE NKSLDSKKSK  240
PAPPQKPKEE AVEDDKPAEA GPENSGSDSG SSGSVPEICG SDSGSDGSSP VSDRTFPDFT  300
DEESTWDMFS ELQKYPSHEI DWASL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.14e-54ERF family protein