PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019151514.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 995aa MW: 109229 Da PI: 6.0278 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 92.4 | 3.4e-29 | 594 | 645 | 1 | 52 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_019151514.1 594 AEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 645 589***********************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 995 aa Download sequence |
MPEPDGTAPP PRSRELLTPL PQSAAAASDR ELLTMDLDLE FSWTFDQIFA AAAASNPAPP 60 FLFSASEQPC SPLWVFSDDN DDAPAGNAAR LSDYSRLISY AGDLDAITEG VSGKDDKRRL 120 PPPVLGSTAK DYLDISCKIK ERISQALRYF KEWTGEHVLA QVWAPVKSGG RYVLTTLGQP 180 FVLDPNSNGL HQYRMVSLKY MFSVDGETDG DLGLPGRVFR QKLPEWTPNV QYYSSKEFPR 240 LSHALDYNVQ GTLALPIFEP SGQSCVGVLE LIMTSQKINY APEVDKVCKA LEAVNLRSSE 300 ILDHPGVQIC NEGRQTALAE ILEILTVVCE NYKLPLAQTW VPCRHRSVLA DGGGLKKSCS 360 SFDGSCMGQV CMSTTDLAFY VVDARMWYFR EACVEHHLQK GQGVAGRAFA SQRSCFCEDI 420 TQFCKTEYPL VHYARMFGLT SCFAICLRST DTGNDDYILE FFLPPRAGNY SDQHTLLSSL 480 LLTMKQHFRT LRVASGDDIE HELGSIEIIK TKMEEKLDLS PESVSLSKST FTQPTKITDA 540 QFCPDTVGDQ KLTAGLNATN DGADRREPFD TQNHASLAGK KDVGKKSVRK RGKAEKSISL 600 EVLQQYFAGS LKDAAKSLGV CPTTMKRICR QHGISRWPSR KINKVNRSLS KLKRVIESVH 660 GAEGAFTLTN LATNSIPVAV GSISWPATVN DSNQHTSPRS RPSESPKEKN AFFNHNAPGY 720 QDDTEPSNQI LGGQVLGNEL APQQNGFAVG EGSNRSRTGS GSGEESTGTP TSHFSCQGSP 780 YRGNESSPPN ELILSPIHCH DTKIGSNTEL TCQPVRAINL LAANSLPNTL VAEQPQEAFG 840 GMLIEDAGSS HNLRNLCSAG ENPFDERMPE CSWTHPPCSV AVPVRPDRVP QYPARPELTT 900 ITIKATYRED IIRFRLPLSS GIIKLTEEVS KRLKLEVGTF DIKYLDDDHE WVLIACDADL 960 QECIDISRSS GSTIIRLLVH DIMPHLGSSC ESSGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G24020.1 | 0.0 | Nin-like family protein |