PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019150895.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 344aa    MW: 37939.9 Da    PI: 4.5685
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019150895.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.45e-20128178155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     + +r++lg+f taeeAa  +++a+ +++g
  XP_019150895.1 128 TKFRGVRQRP-WGKWAAEIRDPL----SrRRVWLGTFNTAEEAAMVYDNAAIQMRG 178
                     69********.**********84....34*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MEEEGMLSTR VKYSEHKRQT TTVRHLPDGG CSGMRSSETN AGLPRVVRIS VTDSDATDSS  60
GDEEGEGGLF WRRRVKKYVN EVTFEAWGRD DGNASCNGVV RSGPTAAKRR KKAETPAVGN  120
SGKVENVTKF RGVRQRPWGK WAAEIRDPLS RRRVWLGTFN TAEEAAMVYD NAAIQMRGPD  180
ALTNFSAPTA AAAVKAPPEE RKPPKSVDSG YNSGEESHNN QRSPKSVLFF NEEPETESFL  240
PPLPNDAVEM SQDFSDYTSV PENFPDFSPF DPLFSNDLFK FDNPVPVPEV FDVTGFSDKI  300
FEEECCGMFI GSSHDTGFGL SALPADDYFL DYGDIFGSDP LVAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-43ERF family protein