PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019150136.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 190aa    MW: 21041.7 Da    PI: 9.2506
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019150136.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.5e-19555155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  ++g
  XP_019150136.1  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAILMNG 55
                    59*******9.**********8.....334**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MVQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDEAA ILMNGRNAKT  60
NFPVAANKDS KDKSSSSASS SSSSLSAILS AKLRKCCKSL SPSLTCLRLD TENSNIGVWQ  120
KRAGAASSDS NWVMTVELGN KQPPPPKQEN YLSSQTSEDT RDVVVVAGNQ TVNEEEKIAL  180
QMIEELLNEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.11e-62ERF family protein