PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG049740.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 530aa MW: 58954.2 Da PI: 5.3559

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG049740.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	53.6	5e-17	154	206	3	55
G2-like 3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkg..LtlehvkSHLQkYRl 55 r W++eLH++F++ave LG + At +i ++m+ k+ Lt++hv+SHLQk+Rl TRIDC7BG049740.1 154 RSTWSSELHKKFLQAVEVLG-A-SATAGKIHQHMNAKDlnLTRQHVASHLQKHRL 206 789**************5.4.48999****973369**********8 PP
2	Myb_DNA-binding	37.1	7.2e-12	154	205	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmg...kgRtlkqcksrwqkyl 48 r W+ e+++++++av+ lG t +I ++m+ +++t+ ++ s++qk++ TRIDC7BG049740.1 154 RSTWSSELHKKFLQAVEVLGASaTAGKIHQHMNakdLNLTRQHVASHLQKHR 205 789***************99**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MENLSVLVLD QDPVSLWTIS NTLARFNFKV LPFHTPEEAL DSLKRGVAKD EELDLIVEEV 60 HPGNTELGTL VLFYHILNEL EVPLITMCAY DEAVSARMTL GTCFNVVKSL DTETINFLRM 120 RALQHRSIKN QRSETEDEEQ DALNANVYSD NLGRSTWSSE LHKKFLQAVE VLGASATAGK 180 IHQHMNAKDL NLTRQHVASH LQKHRLRAQR LSQGYQHYAS MKELSEMISS SYKLASAKPN 240 NYLATTQTQS THGVASSIWD KYPGIVWPNV EGSSAASAMW YNYPGKPWGQ VGESSARAEV 300 SQINAGPPSV LIHGTKSIWD RYEESLQYYN GSPANKREVL PVKSKTLDVY GRKIFINLER 360 EETSRTEAAG KIVIGLESDD MHEGTMDNVH AAVTPQKDTM EKVCAAVTPQ KDAMDEVHAA 420 AIPHGVNEVP AAAMGAGDLM DLGSEALLDG MDNYHPSAEN AQSEPFSDSE WDELEKFWMN 480 RMEGQGQEQQ GLVPLDLLLV DGIAPEMNCS RKTKPGTRRF SRRTSSTTHP

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MENLSVLVLD QDPVSLWTIS NTLARFNFKV LPFHTPEEAL DSLKRGVAKD EELDLIVEEV  60
HPGNTELGTL VLFYHILNEL EVPLITMCAY DEAVSARMTL GTCFNVVKSL DTETINFLRM  120
RALQHRSIKN QRSETEDEEQ DALNANVYSD NLGRSTWSSE LHKKFLQAVE VLGASATAGK  180
IHQHMNAKDL NLTRQHVASH LQKHRLRAQR LSQGYQHYAS MKELSEMISS SYKLASAKPN  240
NYLATTQTQS THGVASSIWD KYPGIVWPNV EGSSAASAMW YNYPGKPWGQ VGESSARAEV  300
SQINAGPPSV LIHGTKSIWD RYEESLQYYN GSPANKREVL PVKSKTLDVY GRKIFINLER  360
EETSRTEAAG KIVIGLESDD MHEGTMDNVH AAVTPQKDTM EKVCAAVTPQ KDAMDEVHAA  420
AIPHGVNEVP AAAMGAGDLM DLGSEALLDG MDNYHPSAEN AQSEPFSDSE WDELEKFWMN  480
RMEGQGQEQQ GLVPLDLLLV DGIAPEMNCS RKTKPGTRRF SRRTSSTTHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-16	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG049740.1