PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG025200.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 217aa    MW: 24644 Da    PI: 6.7667
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG025200.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF83.21.6e-264593250
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                      rie+ + rqv fskRr g++KKA+ELSvLCdaeva+++fs+ g+lye+ 
  TRIDC7BG025200.2 45 RIEDRTSRQVRFSKRRSGLFKKAFELSVLCDAEVALVVFSPAGRLYEFV 93
                      8***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MAEDVGRRRM QQQQQEDERL KAAAAAVEEG VGKRKRKRGR VELRRIEDRT SRQVRFSKRR  60
SGLFKKAFEL SVLCDAEVAL VVFSPAGRLY EFVSSDTSVE QIFGRCKDIP DTVIDDLNIA  120
ARDPRGYCNI QFDLNEQPAP ESVSELNSFA QMALELDVKE MSMAELTRFE EIVTEALAAV  180
KSIRIMKVAE LTQTEARLKR DPQKKGDNWS GQESGKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.13e-24MIKC_MADS family protein