PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG016820.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 302aa    MW: 34177.3 Da    PI: 6.7193
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG016820.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM105.47e-33581971128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sg 81 
                       lp+G++F+P+d+el+ + L+k+ ++ +     + ++   ++e+ +i++++P++Lp  vk++ +  +fF+++ k+y+tg+rk+r+++     + 
  TRIDC7BG016820.2  58 LPKGVKFDPSDQELLGHLLAKHDKAGSqphpfIAEFIPtVEEAdGICYTHPQKLP-GVKQDGSVSHFFHRTFKAYNTGTRKRRKINtsdlaDV 149
                       799************999987655444456542222223666655**********.677888899******************7544455588 PP

               NAM  82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                       +W++tgk+k+v+  +g++ g+kk++v+y  + +  k++kt+Wv+h+y+l
  TRIDC7BG016820.2 150 RWHKTGKTKPVMI-DGQHLGCKKIMVLYmsTVKGGKPKKTNWVIHQYHL 197
                       9************.999***********6644666777*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
LTGTSWLIDS QRIASKIKNV SGSRDLSKQK WLSNPTKECP NCSHVIDNSD VVHQWPGLPK  60
GVKFDPSDQE LLGHLLAKHD KAGSQPHPFI AEFIPTVEEA DGICYTHPQK LPGVKQDGSV  120
SHFFHRTFKA YNTGTRKRRK INTSDLADVR WHKTGKTKPV MIDGQHLGCK KIMVLYMSTV  180
KGGKPKKTNW VIHQYHLGTG EDEQNEEYVV SKLFFQQQNG EKSALELTNT DVMETTVAVA  240
DLTDLPEPTA EEDDERISSI SNQEVLLNNE YNADEEALHS HEHNTYQVVA YSYRYISMHC  300
TF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-106NAC family protein