PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG012900.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 348aa    MW: 37130 Da    PI: 7.1163
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG012900.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.1e-20170219255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++a+ +l+g
  TRIDC7BG012900.3 170 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEDAALAYDKAAFRLRG 219
                       59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
AMAAIDLYGA ANQFSSSSSS SSSDQELMKA LEPFIRSASS TSTSSPFSYY SSSSLPQESC  60
YFPASSSYSY TRLQAPFAPA APATSSSFSQ LPPLPPTSQY STSPSATYPS AGDAVGLASL  120
GPEQIHQIQA QLFLQQQQQQ QRGLSASLLG PRAQPMKLAG APSTSATGKL YRGVRQRHWG  180
KWVAEIRLPK NRTRLWLGTF DTAEDAALAY DKAAFRLRGD AARLNFPNLR RGGAHLAGPL  240
HASVNAKLDS ICQNIAAPAP SSKSSPPDSP KASTSTSSTE GDGSVLSAGS TPLPPPPQSS  300
HHQHQQSAAP LHEMANLDFS EAPWDESDAF HLHQDLHKCP SWEIDWDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.11e-37ERF family protein