PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG053470.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 225aa MW: 25384.5 Da PI: 6.5164 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.9 | 1.3e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqvt+skRr gi+KKA EL vLCda+va+i+fsstgk +e++s TRIDC7AG053470.2 9 KRIENATNRQVTYSKRRSGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 70 | 7.7e-24 | 71 | 168 | 1 | 98 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenka 93 yq++ g+sl+ +++e++q+ l+ Lk+ ++n R+++GedL+ L+++eL+ Leq+++ +lk++R++K++++++q+e+ + k qe+ k+ TRIDC7AG053470.2 71 YQQAIGTSLWIEQYENMQRTLNHLKDINRNSCIHPRQRMGEDLDALEFEELRDLEQNVDAALKEVRQRKYHVITTQTETAYIQVKHSQEAYKN 163 67888999************************************************************************************* PP K-box 94 Lrkkl 98 L+++l TRIDC7AG053470.2 164 LQQEL 168 **986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MGRGKIEIKR IENATNRQVT YSKRRSGIMK KARELTVLCD AQVAIIMFSS TGKYHEFCST 60 GTEYEGIFDR YQQAIGTSLW IEQYENMQRT LNHLKDINRN SCIHPRQRMG EDLDALEFEE 120 LRDLEQNVDA ALKEVRQRKY HVITTQTETA YIQVKHSQEA YKNLQQELGM REDPAYGFVD 180 NPAAGGWDGV AAGGWDGVAA VAMGGGSAAD MYAFRVVPSQ PNLHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 3e-58 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG053470.2 |