PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC7AG025680.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | TCP | ||||||||
Protein Properties | Length: 174aa MW: 18087.4 Da PI: 10.3868 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 108.9 | 7.6e-34 | 49 | 126 | 2 | 77 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaes 77 a +k +++++h+kv+g +RR+R+++ caar+F+L ++LG+++d++tieWLl+qa+p+i+++tg+++++as++ +++s TRIDC7AG025680.2 49 AMRKASSKDRHSKVDGWGRRIRMPIICAARVFQLMRKLGHKSDGQTIEWLLRQAEPSIIAATGSGTTTASFStsSPSS 126 679*************************************************************99999777322222 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 174 aa Download sequence |
ESSELQTPIS SCSTSKESGR ERGGGDGMEN KQLVPVAATN GTNGGGALAM RKASSKDRHS 60 KVDGWGRRIR MPIICAARVF QLMRKLGHKS DGQTIEWLLR QAEPSIIAAT GSGTTTASFS 120 TSSPSSLRPG GNGTAPGEAA ATAAMGPAPG FWALPARADF GQLWSFAPPP EMMV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G08330.1 | 9e-29 | TCP family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC7AG025680.2 |