PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG053210.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 333aa    MW: 35715.9 Da    PI: 6.6819
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG053210.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.9e-20172221255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++a+ +l+g
  TRIDC6BG053210.1 172 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEDAALAYDKAAFRLRG 221
                       59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MAAAIDMYKY NTSTHQIGSA ASASDQELMK ALEPFITIAS SSPYPYQYYS SPSMTQDSYT  60
ATPSSSYASF ATSPLPTTAP TSPSFSQLPP LYSSQYSTAS GMNGSMGLAQ LGPAQIQQIQ  120
AQFFVQQQQQ QRGLAGSFLG PRAQPMKQSG SPPRASAAAL ALAGVAPAQS KLYRGVRQRH  180
WGKWVAEIRL PKNRTRLWLG TFDTAEDAAL AYDKAAFRLR GDLARLNFPS LRRGGAHLAG  240
PLHASVDAKL TAICESLAAP SSKNSAEAEP ESPKCSASTE GEDSASAGSP PPPTPPVPEM  300
EKLDFTEAPW DESETFHLRK YPSVEIDWDS ILS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.12e-48ERF family protein