PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG039220.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 868aa    MW: 96690.8 Da    PI: 8.9949
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG039220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3376.1e-122513321499
                       T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                         l +p k ae+ +++  +++ + led++g+s +v+l  +  +g+  + +GW++Fv+++ +k  +++vF+++g s+f   v+vf++
  TRIDC6BG039220.1 251 EFLLIPPKVAEAPKMVGFTNQLVCLEDSEGKSSRVRL--SVVDGSLAFYQGWSNFVSDHSIKWAEIIVFEYTGCSKF--SVRVFSA 332
                       3489999999888777667889***************..8888999999**********************986777..9999875 PP
2B337.15.6e-127838601491
                       T-EE--HHH.HTT..---...--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS
                B3  14 grlvlpkkfaeeh..ggkke.esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefe 91 
                        rl lp +  ++   +   +     ++l+d+  r W v +    +s  + +t+GWk+Fv an+L++gD +v+ +d + +e  
  TRIDC6BG039220.1 783 TRLELPDPLSNAVghK--GRlDRNIVMLKDPMKRLWPVFY--HETSLFVGFTGGWKSFVAANKLEAGDLCVLLMDLDeDELV 860
                       5677777776555432..221334699999**********..******************************9875534444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 868 aa     Download sequence    
RKASTGSLEK GRRMEEPIEL SDDADDNETI MEMSKKAAKH KEKKRMHNDD GDHKKKKKSM  60
SSHGGDKNTY SADRDKDKRR DMLFSPNRNK DPFHFKEKSG KMPSSHSGER KMHRGDHHNF  120
NKSSRLWRSE YGKYKGMQKK EMNKDKKPWP VHNGGSREGE KKKTALVLSK EGKMPMLHDS  180
SNNGNKWKKT PMMYDKVKKP PTSDKDEKAG SYDRKKTTPG YNAGHKVQSG HGEKKKVKFA  240
FFKVAGKHFE EFLLIPPKVA EAPKMVGFTN QLVCLEDSEG KSSRVRLSVV DGSLAFYQGW  300
SNFVSDHSIK WAEIIVFEYT GCSKFSVRVF SADSWERVSF IVETRGEEKK QKESYAPDDL  360
VPCQNSRDIN GHHYVSGEYT RSNRPKTKSD GYTDNAEVSP GNLVAKSVNA VPGTRHTSAN  420
SIEDPNGVVG GIVRGSSMAP DNKDGHLANG KHTANASFPS YIKVTTRSPE TVVIADEAPL  480
ARENKDTVAL DNKEANLTIR ECKTKCNASI TCNDEKATRL ELVPVTTDAA PLSQENGDAV  540
ELTTFAGHIE DAVMMKESTS AKCAEIHGSD EDLRRKQEGN TVRLECTAVV DKFPSNNKMD  600
TNGDACSKYE YPGGFQCLEK WKEATVSGRE ALDGSGLIRP EKRRKTEEKS VGAMGVNPVE  660
RGYDGTHSCV PSQISESGLT RMKIEHSVNG KGATGKPETK IEQVGTVESI GCRQERNNIS  720
TSANRAVACQ TEHHFFRQED TKSSNPAPPV PLLPVKVEVS ELDDHRPVLK ANLQFVVPST  780
AQTRLELPDP LSNAVGHKGR LDRNIVMLKD PMKRLWPVFY HETSLFVGFT GGWKSFVAAN  840
KLEAGDLCVL LMDLDEDELV YDVEITRK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14358KKRMHNDDGDHKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-07B3 family protein