PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG032360.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 396aa MW: 43758.7 Da PI: 4.8674

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG032360.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	59.9	8.3e-19	10	94	54	128
NAM 54 eekewyfFskrdkkyatgkrknra.........tksgyWkatgkdkevlskkgelvglkktLvfykgrapkge..ktdWvmheyrl 128 + ++ +fF++ +++y g+rk+r ++ +W++tgk+k+v++ +g +g kk+Lv+ykg++ g+ ktdWvmh+y+l TRIDC6AG032360.3 10 DGSSAHFFHSISNAYGCGQRKRRRisssdrttsDEHVRWHKTGKSKPVYD-NGVMKGWKKILVLYKGSQTGGKpdKTDWVMHQYHL 94 45678***************9757888875444889********.999*******9987766555*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
LFIFIGTNKD GSSAHFFHSI SNAYGCGQRK RRRISSSDRT TSDEHVRWHK TGKSKPVYDN 60 GVMKGWKKIL VLYKGSQTGG KPDKTDWVMH QYHLGVEENE KVGEFVVSKI FYQLKTRPVD 120 KSEAEMANEE STAFTASICP KTPMTKIPPC RPKNSPCETE QNDPGQEEET VSLAENANNP 180 AWCALSSQPV EVALEAGTCS LDKSLRHHEV LDSSNLENST FGRPILSQLM NETLNKNLCA 240 LHGLPDLHNV NLGTAPTDLQ ITKGENVSLV ADAENTACCS LASQDVEKEE SVSLVDEAEK 300 WCGLASQAVD VAFHAGTSLD ESLRCHEVLD SFDHEKSLTF DRPIYSQGRD GGLENNLYSL 360 NGLPDLQGVD FGTPIDDLQG LQFYSQESLG SWLERM

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

LFIFIGTNKD GSSAHFFHSI SNAYGCGQRK RRRISSSDRT TSDEHVRWHK TGKSKPVYDN  60
GVMKGWKKIL VLYKGSQTGG KPDKTDWVMH QYHLGVEENE KVGEFVVSKI FYQLKTRPVD  120
KSEAEMANEE STAFTASICP KTPMTKIPPC RPKNSPCETE QNDPGQEEET VSLAENANNP  180
AWCALSSQPV EVALEAGTCS LDKSLRHHEV LDSSNLENST FGRPILSQLM NETLNKNLCA  240
LHGLPDLHNV NLGTAPTDLQ ITKGENVSLV ADAENTACCS LASQDVEKEE SVSLVDEAEK  300
WCGLASQAVD VAFHAGTSLD ESLRCHEVLD SFDHEKSLTF DRPIYSQGRD GGLENNLYSL  360
NGLPDLQGVD FGTPIDDLQG LQFYSQESLG SWLERM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	29	33	RKRRR
2	29	55	RKRRRISSSDRTTSDEHVRWHKTGKSK
3	30	34	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	5e-34	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG032360.3