PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG012550.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 125aa MW: 14008.2 Da PI: 11.7561 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.5 | 9.4e-20 | 17 | 67 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+++G+r+++ +g+W+AeIrdps+ +r++lg+f +aeeAa+a++ +++++g TRIDC6AG012550.3 17 SQFRGIRQRP-WGKWAAEIRDPSK---GARVWLGTFNSAEEAARAYDVEARRIRG 67 789*******.**********965...4************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 125 aa Download sequence |
MTTAGFDGPS AKRKRKSQFR GIRQRPWGKW AAEIRDPSKG ARVWLGTFNS AEEAARAYDV 60 EARRIRGNKA KVNFPKEPIV PQKRRARPGA PKAPKLSVPL ALPDNLSFXX XXLPAVWSSV 120 SEMTY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72360.1 | 6e-34 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG012550.3 |