PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG014980.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WOX | ||||||||
Protein Properties | Length: 321aa MW: 34541.9 Da PI: 10.9165 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.3 | 1.3e-18 | 41 | 100 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 R+t+tkeq+ +Le l+++ r+p+ae++++ +++l ++ ++V++WFqN++a++++ TRIDC5BG014980.2 41 ARWTPTKEQVGVLEGLYRQgLRTPTAEQIQQVTARLqkhgPIEGKNVFYWFQNHKARQRQ 100 7*****************99****************99999*****************96 PP | |||||||
2 | Wus_type_Homeobox | 108.9 | 2.9e-35 | 40 | 102 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RWtPt+eQ+ +Le ly++GlrtP++e+iq++ta+L+++G ie+kNVfyWFQN+kaR+rq+q TRIDC5BG014980.2 40 NARWTPTKEQVGVLEGLYRQGLRTPTAEQIQQVTARLQKHGPIEGKNVFYWFQNHKARQRQRQ 102 78***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
MESAEHQQQA ATRSRSPSLP AAPPSPPLSP NSAAAAALAN ARWTPTKEQV GVLEGLYRQG 60 LRTPTAEQIQ QVTARLQKHG PIEGKNVFYW FQNHKARQRQ RQKQQAFDYF SKQFRRPQPL 120 PVLHRPAAHP SLPPIPLQAP PPHMSSATPP DLPASPACNR QAMHRQQPSY VTAAAAVAAT 180 QAAANASHYM QTQTQTPMLY PGVEAVAHDK VQTQAPATMY HQAPAQNNAG TQQPRALQLP 240 PAAGTHGPPA ARSRRPETLN LFPLHPTFAI PQKTRPAGIA GSATPTATVP SASGSGSFSW 300 EPESPRGDAS LPLYDFFGVG R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59340.1 | 1e-19 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG014980.2 |