PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG046220.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 222aa MW: 24835.6 Da PI: 4.8622 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.8 | 5.7e-18 | 50 | 104 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 + y+GVr++ + g+Wv+e+r+p+++g + r +lg+f tae+Aa+a++ a+++l g+ TRIDC5AG046220.1 50 PVYRGVRRRGREGQWVCELRVPVSRG-YSRLWLGTFATAEMAARAHDSAALALSGH 104 68*******************99988.9************************9886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
RVMDTVAAWQ QFEGQEYMTV WPEEQEYRTV WSEPPKRRAG RIKLQETRHP VYRGVRRRGR 60 EGQWVCELRV PVSRGYSRLW LGTFATAEMA ARAHDSAALA LSGHDACLNF ADSAWRMMPV 120 HATGSFRFAP AQEIKDAVAV ALEAFQEQHH ADASTTEASA PSITSSDLSG LDDELLIDGM 180 DAGSYYASLA QGMLMEPPAA GAWREDHEHD DGFDTPTSLW SY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 4e-28 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG046220.1 |