PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5AG046140.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 241aa MW: 25747.1 Da PI: 12.4027 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54 | 4.1e-17 | 50 | 101 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ + g+Wv+e+r+p g k r +lg+f tae+Aa+a++aa ++l g TRIDC5AG046140.2 50 LYRGVRRRGRVGQWVCEVRVP---GiKGSRLWLGTFNTAEMAARAHDAAVLALSG 101 69******************9...8777*********************999876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 241 aa Download sequence |
ERLRQLSTQM DVADIASPSG QQEQGHRTVS SEPPKRPAGR TKFHETRHPL YRGVRRRGRV 60 GQWVCEVRVP GIKGSRLWLG TFNTAEMAAR AHDAAVLALS GRAACLNFAD SAWRMLPVLA 120 AGSFGFGSAT GPDRRRRGGA PAEAGSGRRR RGGAPAAASS GRRRRRGAPA AADHSSSRVP 180 GARVLHVVRR PVGAGRGAVV WRHGGRIVLR ELGAGDARGA AGRKSEAGER RAERRPDAAM 240 E |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 134 | 151 | RRRRGGAPAEAGSGRRRR |
2 | 135 | 152 | RRRRGGAPAEAGSGRRRR |
3 | 148 | 165 | RRRRGGAPAEAGSGRRRR |
4 | 149 | 166 | RRRRGGAPAEAGSGRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G25480.1 | 3e-25 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5AG046140.2 |