PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG000810.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 744aa MW: 82466.5 Da PI: 10.0049

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG000810.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.4	7e-08	45	80	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+++E e+++ a +++G++ W+++a + Rt ++ TRIDC5AG000810.3 45 QWSKDELERFYAAYRKYGKD-WRKVAGAVH-DRTSDMV 80 6***************99.****999.9997665 PP

Sequence ? help Back to Top
Protein Sequence Length: 744 aa Download sequence
MSSTRKVRNV NKRYAKINED WPEKDATVVH KNKVRKKKLS DLGSQWSKDE LERFYAAYRK 60 YGKDWRKVAG AVHDRTSDMV EALYNMNRAY LSLPEGTATA AGLIAMMTDH YNILDGSNSD 120 HESNGSPKTS RKPQKRGRAK LQSVSKASDT RYPDLLQSQP ASSSYGCLSL LKKKRSGDLF 180 VGNKPRAVGK RTPRVPVASM YRDDKIGPSN RQAKPDANNG DEEGALAALA LAEVCQRGSP 240 QVSQTSGRSS GQMFLSPGKS IDRKNADSEM GSSKMHGFQV DADYPEGSLG SREAETGDYP 300 KDASYFLNNE GSASGKSKPK VKRSQKRRKK AAHKTDDQFE DDREACSGTE EGCSSRKAKD 360 ISDLDVFGSK GSWPSNKSNK RSRQLFFGDE LSALDALHTL ADISVNILQP SSIAESESSA 420 QFKDGSKDNE SDDKPSVPAA VSLFDKKDKP RKTKKIKRQS EIASNEVVTR KKARLSKDHH 480 HDGSTSDVKQ DDCKCGVKME KKKRKSSTLK ISKDEKNTLK DSEKTEASAE EGKVSSNKGR 540 HTHVSPVSKQ NKSKAQESSP AHADFGKEAM DTVDMTENAI TQQSDSASKS KSRRKLGILK 600 ALAPESKPAE GADDSCDNVS YPVNNVAELK DKLSHCLSSR FLRRWCMSEW FYSAIDYPWF 660 AKSEFVEYLN HVKLGHVPRL TRVEWGVIRR SVIFSCLVCF CFVCFSESTV LQFSWKATSI 720 VKAVFTRGEG KAFSVSRVSQ TTLC

Sequence ? help Back to Top

Protein Sequence Length: 744 aa Download sequence

MSSTRKVRNV NKRYAKINED WPEKDATVVH KNKVRKKKLS DLGSQWSKDE LERFYAAYRK  60
YGKDWRKVAG AVHDRTSDMV EALYNMNRAY LSLPEGTATA AGLIAMMTDH YNILDGSNSD  120
HESNGSPKTS RKPQKRGRAK LQSVSKASDT RYPDLLQSQP ASSSYGCLSL LKKKRSGDLF  180
VGNKPRAVGK RTPRVPVASM YRDDKIGPSN RQAKPDANNG DEEGALAALA LAEVCQRGSP  240
QVSQTSGRSS GQMFLSPGKS IDRKNADSEM GSSKMHGFQV DADYPEGSLG SREAETGDYP  300
KDASYFLNNE GSASGKSKPK VKRSQKRRKK AAHKTDDQFE DDREACSGTE EGCSSRKAKD  360
ISDLDVFGSK GSWPSNKSNK RSRQLFFGDE LSALDALHTL ADISVNILQP SSIAESESSA  420
QFKDGSKDNE SDDKPSVPAA VSLFDKKDKP RKTKKIKRQS EIASNEVVTR KKARLSKDHH  480
HDGSTSDVKQ DDCKCGVKME KKKRKSSTLK ISKDEKNTLK DSEKTEASAE EGKVSSNKGR  540
HTHVSPVSKQ NKSKAQESSP AHADFGKEAM DTVDMTENAI TQQSDSASKS KSRRKLGILK  600
ALAPESKPAE GADDSCDNVS YPVNNVAELK DKLSHCLSSR FLRRWCMSEW FYSAIDYPWF  660
AKSEFVEYLN HVKLGHVPRL TRVEWGVIRR SVIFSCLVCF CFVCFSESTV LQFSWKATSI  720
VKAVFTRGEG KAFSVSRVSQ TTLC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	318	330	KPKVKRSQKRRKK
2	321	327	VKRSQKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	1e-103	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG000810.3