PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG058890.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 148aa MW: 16753.8 Da PI: 10.0535 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 65.8 | 4.4e-21 | 68 | 117 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rie+ + rqv fskRr g++KKA+E L daeva+++fs+ g+lyey+s TRIDC4BG058890.1 68 RIEDRTSRQVRFSKRRLGLFKKAFEFGLLYDAEVALLVFSPAGRLYEYAS 117 8***********************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence |
LSAHWRAHAD ISAWWFVNLM EGPVPSLSLI FARSSPHPIS ERHTPASERQ PEEARRGMVR 60 RGPVELRRIE DRTSRQVRFS KRRLGLFKKA FEFGLLYDAE VALLVFSPAG RLYEYASSSI 120 EDTYDRYQAF GGAGKNLNEG GASTNNVN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 5e-28 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG058890.1 |