PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG058350.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 324aa MW: 35700.6 Da PI: 6.7834 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88 | 5e-28 | 111 | 161 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA+ELSvLCdaeva+++fs++g+lye+ s TRIDC4BG058350.3 111 KRIENPTSRQVTFSKRRGGLLKKAFELSVLCDAEVALVVFSPRGRLYEFTS 161 79***********************************************75 PP | |||||||
2 | K-box | 55.3 | 2.9e-19 | 183 | 273 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++++e+ + +++ L k+++ L+ + +llG++Le++s++eLq+Le ++eksl iR+ K++ + eq+++l++ke l+++n++L ++ + TRIDC4BG058350.3 183 TVQQDMEKIKADAEGLSKKLDALEACKSKLLGQNLEECSIEELQSLEVKIEKSLLGIRAMKTRRFEEQLSTLRQKEMTLRQHNEELYSQCQ 273 5678899*******************************************************************************98875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
PTTSTQNFLF LFPLGPGASP PATRDGVAAT PSGPGTEKES QGGEEEEEEG EGGAAASYGR 60 TLHRSDLTAL AIFGRLIGGG RFFWFGLVPD RICGWEERRG AKMVRGKTQM KRIENPTSRQ 120 VTFSKRRGGL LKKAFELSVL CDAEVALVVF SPRGRLYEFT SSSMKNTIER YKTVTKDNMS 180 RQTVQQDMEK IKADAEGLSK KLDALEACKS KLLGQNLEEC SIEELQSLEV KIEKSLLGIR 240 AMKTRRFEEQ LSTLRQKEMT LRQHNEELYS QCQKEQHLAS EAAAPPAPAT LAALPAPVTL 300 EEQGQQMVDV ETDLFLGLPG TGRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 2e-64 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG058350.3 |