PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG042540.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 546aa    MW: 59991.7 Da    PI: 5.1917
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG042540.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.39.3e-17852111128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                       lp+G +F+P+d++l+  +L++++ +        +  +e+ik  d       ++P+d+p  ++++ + ++fF+k+ + +++++   +   +  W
  TRIDC4BG042540.4  85 LPRGAQFNPSDSDLL-WHLAAEMGNGLahrhpfI--SEFIKYGDegarFGCTHPRDMP-GMRQDGHALHFFHKKVNLHNNEND--K---DISW 168
                       699************.667777666553454432..2233322233338899******.667788999*****9987755333..3...335* PP

               NAM  84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +++g +++++  +g l g+k+++++y + ++++++tdW +h+y++
  TRIDC4BG042540.4 169 QKSGPSRSIIL-DGGLQGCKEIFALY-AFKNSPQRTDWELHQYHI 211
                       ***********.999***********.5677779*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    
LPHFSRSNPN PTMAFDIDSL PPLLGPDPDS YSDSDHLPPA PRRGRPLRPP PAPRVEPSPQ  60
APGRCEATPA PEGIGGAAQQ SWPGLPRGAQ FNPSDSDLLW HLAAEMGNGL AHRHPFISEF  120
IKYGDEGARF GCTHPRDMPG MRQDGHALHF FHKKVNLHNN ENDKDISWQK SGPSRSIILD  180
GGLQGCKEIF ALYAFKNSPQ RTDWELHQYH IKNTMENEGE LVLSKIFYKS QKCHCECASK  240
APVQSAQDNS VTDDDSKEKE GAQLEKLSVN MATESNFVEG NGNNREQMLV EMYPDQDKPC  300
SLKHVLDTAD VNHENQINDQ AETELDHMSL QERYRILLAD MRSCSARVSA EKCALNDMGN  360
SSMQMDAETS GPVPKSESEE INHGGTTYRE CSVNGKEIPV EDTEGPVNDK AFNSSAELLL  420
SQTPACGDEN VQLAPRNSGT YLVDVKTEPA LDGCAIYPSE SPSVKFHHSN NNGLKVSGSL  480
LECVPKDAED SLPSLGVKSE LSGYELPGLC ENSFISSMEP IVKKPHTRTL NCNGGLAPCS  540
RQRNKR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1541546RQRNKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.13e-37NAC family protein