PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG042540.20

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 742aa MW: 83364.8 Da PI: 5.0173

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG042540.20	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	52.6	1.5e-16	5	131	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 lp+G +F+P+d++l+ +L++++ + + +e+ik d ++P+d+p ++++ + ++fF+k+ + +++++ + + TRIDC4BG042540.20 5 LPRGAQFNPSDSDLL-WHLAAEMGNGLahrhpfI--SEFIKYGDegarFGCTHPRDMP-GMRQDGHALHFFHKKVNLHNNEND--K---DIS 87 699**********.667777666553454432..2233322233338899**.667788999*9987755333..3...335 PP NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 W+++g +++++ +g l g+k+++++y + ++++++tdW +h+y++ TRIDC4BG042540.20 88 WQKSGPSRSIIL-DGGLQGCKEIFALY-AFKNSPQRTDWELHQYHI 131 ********.999*******.5677779*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 742 aa Download sequence
SWPGLPRGAQ FNPSDSDLLW HLAAEMGNGL AHRHPFISEF IKYGDEGARF GCTHPRDMPG 60 MRQDGHALHF FHKKVNLHNN ENDKDISWQK SGPSRSIILD GGLQGCKEIF ALYAFKNSPQ 120 RTDWELHQYH IKNTMENEGE LVLSKIFYKS QKCHCECASK APVQSAQDNS VTDDDSKEKE 180 GAQLEKLSVN MATESNGNNR EQMLVEMYPD QDKPCSLKHV LDTADVNHEN QINDQAETEL 240 DHMSLQERYR ILLADMRSCS ARVSAEKCAL NDMGNSSMQM DAETSGPVPK SESEEINHGG 300 TTYRECSVNG KEIPVEDTEG PVNDKAFNSS AELLLSQTPA CGDENVQLAP RNSGTYLVDV 360 KTEPALDGCA IYPSESPSVK FHHSNNNGLK VSGSLLECVP KDAEDSLPSL GVKSELSGYE 420 LPGLCENSFI SSMEPIVKKP HTRTLNCNGG LAPCSRQRNK RDSSEKVLEE DGYKNDEGIP 480 YPSRQKRKKK TATDSIETAL EEDAPGLLQI LLDKGIVVKE IKLYDVVEDD EMLPDCTESD 540 FQDLENVITK LFPQRTSLLK SVAKHGKGGK AIYCLACLIS LIEQFRDCPV EWGWCRDLQS 600 FIFVFKSHNR LVLERPEYGY ATYFFEILQS VPIEWQIRRM VTAMKLSSCG RTALIENRPL 660 LIGEDLSEGE AKVLQEYGWI PNTGLGTLLN YRDRVVHDRW NEKYSTDWRM KIGKLLMNGY 720 SEGELIITHV PLNSEEIKLE NP

Sequence ? help Back to Top

Protein Sequence Length: 742 aa Download sequence

SWPGLPRGAQ FNPSDSDLLW HLAAEMGNGL AHRHPFISEF IKYGDEGARF GCTHPRDMPG  60
MRQDGHALHF FHKKVNLHNN ENDKDISWQK SGPSRSIILD GGLQGCKEIF ALYAFKNSPQ  120
RTDWELHQYH IKNTMENEGE LVLSKIFYKS QKCHCECASK APVQSAQDNS VTDDDSKEKE  180
GAQLEKLSVN MATESNGNNR EQMLVEMYPD QDKPCSLKHV LDTADVNHEN QINDQAETEL  240
DHMSLQERYR ILLADMRSCS ARVSAEKCAL NDMGNSSMQM DAETSGPVPK SESEEINHGG  300
TTYRECSVNG KEIPVEDTEG PVNDKAFNSS AELLLSQTPA CGDENVQLAP RNSGTYLVDV  360
KTEPALDGCA IYPSESPSVK FHHSNNNGLK VSGSLLECVP KDAEDSLPSL GVKSELSGYE  420
LPGLCENSFI SSMEPIVKKP HTRTLNCNGG LAPCSRQRNK RDSSEKVLEE DGYKNDEGIP  480
YPSRQKRKKK TATDSIETAL EEDAPGLLQI LLDKGIVVKE IKLYDVVEDD EMLPDCTESD  540
FQDLENVITK LFPQRTSLLK SVAKHGKGGK AIYCLACLIS LIEQFRDCPV EWGWCRDLQS  600
FIFVFKSHNR LVLERPEYGY ATYFFEILQS VPIEWQIRRM VTAMKLSSCG RTALIENRPL  660
LIGEDLSEGE AKVLQEYGWI PNTGLGTLLN YRDRVVHDRW NEKYSTDWRM KIGKLLMNGY  720
SEGELIITHV PLNSEEIKLE NP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	456	461	RQRNKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	4e-36	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG042540.20