PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG042540.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 820aa MW: 91630 Da PI: 4.9732

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG042540.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	52.4	1.8e-16	73	199	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyW 83 lp+G +F+P+d++l+ +L++++ + + +e+ik d ++P+d+p ++++ + ++fF+k+ + +++++ + + W TRIDC4BG042540.1 73 LPRGAQFNPSDSDLL-WHLAAEMGNGLahrhpfI--SEFIKYGDegarFGCTHPRDMP-GMRQDGHALHFFHKKVNLHNNEND--K---DISW 156 699**********.667777666553454432..2233322233338899**.667788999**9987755333..3...335 PP NAM 84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++g +++++ +g l g+k+++++y + ++++++tdW +h+y++ TRIDC4BG042540.1 157 QKSGPSRSIIL-DGGLQGCKEIFALY-AFKNSPQRTDWELHQYHI 199 *********.999*******.5677779*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 820 aa Download sequence
MAFDIDSLPP LLGPDPDSYS DSDHLPPAPR RGRPLRPPPA PRVEPSPQAP GRCEATPAPE 60 GIGGAAQQSW PGLPRGAQFN PSDSDLLWHL AAEMGNGLAH RHPFISEFIK YGDEGARFGC 120 THPRDMPGMR QDGHALHFFH KKVNLHNNEN DKDISWQKSG PSRSIILDGG LQGCKEIFAL 180 YAFKNSPQRT DWELHQYHIK NTMENEGELV LSKIFYKSQK CHCECASKAP VQSAQDNSVT 240 DDDSKEKEGA QLEKLSVNMA TESNFVEGNG NNREQMLVEM YPDQDKPCSL KHVLDTADVN 300 HENQINDQAE TELDHMSLQE RYRILLADMR SCSARVSAEK CALNDMGNSS MQMDAETSGP 360 VPKSESEEIN HGGTTYRECS VNGKEIPVED TEGPVNDKAF NSSAELLLSQ TPACGDENVQ 420 LAPRNSGTYL VDVKTEPALD GCAIYPSESP SVKFHHSNNN GLKVSGSLLE CVPKDAEDSL 480 PSLGVKSELS GYELPGLCEN SFISSMEPIV KKPHTRTLNC NGGLAPCSRQ RNKRDSSEKV 540 LEEDGYKNDE GIPYPSRQKR KKKTATDSIE TALEEDAPGL LQILLDKGIV VKEIKLYDVV 600 EDDEMLPDCT ESDFQDLENV ITKLFPQRTS LLKSVAKHGK GGKAIYCLAC LISLIEQSRY 660 LQFRDCPVEW GWCRDLQSFI FVFKSHNRLV LERPEYGYAT YFFEILQSVP IEWQIRRMVT 720 AMKLSSCGRT ALIENRPLLI GEDLSEGEAK VLQEYGWIPN TGLGTLLNYR DRVVHDRWNE 780 KYSTDWRMKI GKLLMNGYSE GELIITHVPL NSEEIKLENP

Sequence ? help Back to Top

Protein Sequence Length: 820 aa Download sequence

MAFDIDSLPP LLGPDPDSYS DSDHLPPAPR RGRPLRPPPA PRVEPSPQAP GRCEATPAPE  60
GIGGAAQQSW PGLPRGAQFN PSDSDLLWHL AAEMGNGLAH RHPFISEFIK YGDEGARFGC  120
THPRDMPGMR QDGHALHFFH KKVNLHNNEN DKDISWQKSG PSRSIILDGG LQGCKEIFAL  180
YAFKNSPQRT DWELHQYHIK NTMENEGELV LSKIFYKSQK CHCECASKAP VQSAQDNSVT  240
DDDSKEKEGA QLEKLSVNMA TESNFVEGNG NNREQMLVEM YPDQDKPCSL KHVLDTADVN  300
HENQINDQAE TELDHMSLQE RYRILLADMR SCSARVSAEK CALNDMGNSS MQMDAETSGP  360
VPKSESEEIN HGGTTYRECS VNGKEIPVED TEGPVNDKAF NSSAELLLSQ TPACGDENVQ  420
LAPRNSGTYL VDVKTEPALD GCAIYPSESP SVKFHHSNNN GLKVSGSLLE CVPKDAEDSL  480
PSLGVKSELS GYELPGLCEN SFISSMEPIV KKPHTRTLNC NGGLAPCSRQ RNKRDSSEKV  540
LEEDGYKNDE GIPYPSRQKR KKKTATDSIE TALEEDAPGL LQILLDKGIV VKEIKLYDVV  600
EDDEMLPDCT ESDFQDLENV ITKLFPQRTS LLKSVAKHGK GGKAIYCLAC LISLIEQSRY  660
LQFRDCPVEW GWCRDLQSFI FVFKSHNRLV LERPEYGYAT YFFEILQSVP IEWQIRRMVT  720
AMKLSSCGRT ALIENRPLLI GEDLSEGEAK VLQEYGWIPN TGLGTLLNYR DRVVHDRWNE  780
KYSTDWRMKI GKLLMNGYSE GELIITHVPL NSEEIKLENP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	529	534	RQRNKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	5e-36	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG042540.1