PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG042180.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 622aa MW: 67149.2 Da PI: 8.1296

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG042180.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.1	1.9e-28	141	194	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av++L G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl TRIDC4BG042180.2 141 KPRVVWSVELHQQFVNAVNHL-GIDKAVPKKILELMNVPGLTRENVASHLQKFRL 194 79*****************.******************************8 PP
2	Myb_DNA-binding	39.8	1.1e-12	143	193	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v+av+ lG + +k+I + m+ g+t++++ s++qk++ TRIDC4BG042180.2 143 RVVWSVELHQQFVNAVNHLGIDkaVPKKILELMNvPGLTRENVASHLQKFR 193 678**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
LLRSRKRFYY LLFSMFTCEW DAILKLVGDI SVMSADSRTD LVMKGIKHGA CDYLIKPVRM 60 EELKNIWQHV VRKKFGGNKE HEHSGSLDDT DRNRLTNNDN EYASSANDGA EDSWKSQKKK 120 RDKEEDDSEL ESGDPSNNSK KPRVVWSVEL HQQFVNAVNH LGIDKAVPKK ILELMNVPGL 180 TRENVASHLQ KFRLYLKRIA QHHAGMTNPY GVPASSAQVA SLGGLDFQAL AASGQIPPQA 240 LAALQDELLG RPTNSLVLPG RDQSSLRLAA VKGNKPHGEQ IAFGQPIYKV QNNSYAALPQ 300 NSSAVGRMPS FSAWPNNKLG MSDSMSALGN VNNSQNSNMV LHELQQQPDT MLSGTLHTLD 360 VKPSGIVMPS QSLNTFPASE GLSPNQNSLI IPSQSSGFLT GIPPSMKPEL VLPTSQSSNS 420 LLGGIDLINQ ASTSQPFISS HGGNLPGLMN RNSNVMSSQG ISSFQTGNTP YLVNQNPMGV 480 GSKPPGVLKT ESTDSLNQSY AYANHIDSGL LSSQSKNAQF GFLQSPNDVT GGWSSFQNMD 540 GYRNTVGPSQ PVSSSSSFQS SNAALGKLPD QGRGKNLGFV GKGTCIPNRF AVDEIESPTN 600 SLSHSIGSSG DIPDMFGFSG QM

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

LLRSRKRFYY LLFSMFTCEW DAILKLVGDI SVMSADSRTD LVMKGIKHGA CDYLIKPVRM  60
EELKNIWQHV VRKKFGGNKE HEHSGSLDDT DRNRLTNNDN EYASSANDGA EDSWKSQKKK  120
RDKEEDDSEL ESGDPSNNSK KPRVVWSVEL HQQFVNAVNH LGIDKAVPKK ILELMNVPGL  180
TRENVASHLQ KFRLYLKRIA QHHAGMTNPY GVPASSAQVA SLGGLDFQAL AASGQIPPQA  240
LAALQDELLG RPTNSLVLPG RDQSSLRLAA VKGNKPHGEQ IAFGQPIYKV QNNSYAALPQ  300
NSSAVGRMPS FSAWPNNKLG MSDSMSALGN VNNSQNSNMV LHELQQQPDT MLSGTLHTLD  360
VKPSGIVMPS QSLNTFPASE GLSPNQNSLI IPSQSSGFLT GIPPSMKPEL VLPTSQSSNS  420
LLGGIDLINQ ASTSQPFISS HGGNLPGLMN RNSNVMSSQG ISSFQTGNTP YLVNQNPMGV  480
GSKPPGVLKT ESTDSLNQSY AYANHIDSGL LSSQSKNAQF GFLQSPNDVT GGWSSFQNMD  540
GYRNTVGPSQ PVSSSSSFQS SNAALGKLPD QGRGKNLGFV GKGTCIPNRF AVDEIESPTN  600
SLSHSIGSSG DIPDMFGFSG QM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	7e-63	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG042180.2