PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG042180.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 677aa    MW: 72880.8 Da    PI: 6.8368
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG042180.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like902.2e-28196249155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kpr++W+ eLH++Fv+av++L G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl
  TRIDC4BG042180.1 196 KPRVVWSVELHQQFVNAVNHL-GIDKAVPKKILELMNVPGLTRENVASHLQKFRL 249
                       79*******************.********************************8 PP
2Myb_DNA-binding39.61.2e-12198248148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W+ e+++++v+av+ lG +   +k+I + m+  g+t++++ s++qk++
  TRIDC4BG042180.1 198 RVVWSVELHQQFVNAVNHLGIDkaVPKKILELMNvPGLTRENVASHLQKFR 248
                       678**********************************************97 PP
3Response_reg76.78.4e-26121201109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl+vdD+++ + +l+++l + +y +++++++++ al++l+e++  +D+i+ D+ mp+m+G++ll+     e++lp+i+++a +  +++ + +k
  TRIDC4BG042180.1  12 VLVVDDDQTCLAVLKRMLVQCRY-DATTCSQATRALAMLRENRgaFDVIISDVHMPDMNGFRLLELVGL-EMDLPVIMMSADSRTDLVMKGIK 102
                       89*********************.*****************9999*******************87754.558******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+ +eel +
  TRIDC4BG042180.1 103 HGACDYLIKPVRMEELKN 120
                       ***************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 677 aa     Download sequence    
GGGDQFPVGM KVLVVDDDQT CLAVLKRMLV QCRYDATTCS QATRALAMLR ENRGAFDVII  60
SDVHMPDMNG FRLLELVGLE MDLPVIMMSA DSRTDLVMKG IKHGACDYLI KPVRMEELKN  120
IWQHVVRKKF GGNKEHEHSG SLDDTDRNRL TNNDNEYASS ANDGAEDSWK SQKKKRDKEE  180
DDSELESGDP SNNSKKPRVV WSVELHQQFV NAVNHLGIDK AVPKKILELM NVPGLTRENV  240
ASHLQKFRLY LKRIAQHHAG MTNPYGVPAS SAQVASLGGL DFQALAASGQ IPPQALAALQ  300
DELLGRPTNS LVLPGRDQSS LRLAAVKGNK PHGEQIAFGQ PIYKVQNNSY AALPQNSSAV  360
GRMPSFSAWP NNKLGMSDSM SALGNVNNSQ NSNMVLHELQ QQPDTMLSGT LHTLDVKPSG  420
IVMPSQSLNT FPASEGLSPN QNSLIIPSQS SGFLTGIPPS MKPELVLPTS QSSNSLLGGI  480
DLINQASTSQ PFISSHGGNL PGLMNRNSNV MSSQGISSFQ TGNTPYLVNQ NPMGVGSKPP  540
GVLKTESTDS LNQSYAYANH IDSGLLSSQS KNAQFGFLQS PNDVTGGWSS FQNMDGYRNT  600
VGPSQPVSSS SSFQSSNAAL GKLPDQGRGK NLGFVGKGTC IPNRFAVDEI ESPTNSLSHS  660
IGSSGDIPDM FGFSGQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-108ARR-B family protein