PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG018280.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 492aa    MW: 53868.7 Da    PI: 6.4644
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG018280.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like106.71.3e-33272326155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       k+r+rWtpeLHe+Fv+ v++LGGsekAtPk +l+lmkv+gLt++hvkSHLQkYR+
  TRIDC4AG018280.1 272 KQRMRWTPELHECFVDSVNKLGGSEKATPKGVLKLMKVDGLTIYHVKSHLQKYRT 326
                       79****************************************************8 PP
2Myb_DNA-binding50.64.6e-16274325148
                       TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r+rWT+e++e +vd v++lGg    t+k + + m   g+t +++ks++qky+
  TRIDC4AG018280.1 274 RMRWTPELHECFVDSVNKLGGSekaTPKGVLKLMKvDGLTIYHVKSHLQKYR 325
                       89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    
AVGVRGAPPP GNWWASSSSC AHQEHIKINL WERHNACAQF LMRRCDLRQS HNSRVSGGMS  60
SSLPILPNSL KETFHGPYNP QLTPMQRQLT SDLVPLHQSA LPSATLHPRA GAMRSSYAAS  120
LGYSPNPLDS APNHERQSMV APFAPQPSDI EVFQTLSNNI PGGHTGATWF PGSADGLSDY  180
RDNIPASGSQ IQNGGPAVTS DVVAKQNEWW AEIMNDDWRD ILDATAADPQ SKSMVQPSNS  240
AASQPAVNQP ASSHGGEICN VASPPNSNSA AKQRMRWTPE LHECFVDSVN KLGGSEKATP  300
KGVLKLMKVD GLTIYHVKSH LQKYRTARYK PDLTEGTAEK RTTTEELTLD LKSSMDLTEA  360
LRLQMEVQKR LHEQLETQRK LQLRIEEQGK YLQMMFEKQS KSNTEKVQDL SSGATTTLLS  420
EPSHPATRDR DNDAADDLNR TGENPVSAEI GETSMHAGGN QEMAESESSD PLANTNDGSK  480
APQEKRQRVH DS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.14e-71G2-like family protein