PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG055520.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 374aa MW: 40922.9 Da PI: 8.1141

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG055520.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.2	4.5e-21	202	262	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps++++++++++l +++e++V++WFqNrRa+ k+ TRIDC3BG055520.3 202 RQRWTPTQMQLQILESIFDQgNGTPSKQKIKDITAELsqhgQISETNVYNWFQNRRARSKR 262 89***************99************************************97 PP
2	Wus_type_Homeobox	102.3	3.3e-33	201	264	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPt+ Q++iLe+++++G tP+k++i++itaeL+++G+i+++NV++WFQNr+aR+++kq TRIDC3BG055520.3 201 ARQRWTPTQMQLQILESIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQ 264 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
AGPRPPPAPP ASPAPSSPPA AHFGPNSRGS SSLPTYLLPQ TAGGKAPYPS CSFLSRVSTA 60 PPQPGFGIGR ADFLPFPRHQ DPILFFLSKN PILPASFLPT AWAPPFLRVS GLTMEWDKAS 120 AAAAAGEPAE ERGEALGYVK VMTDEQMEVL RKQISIYATI CEQLVEMHRA LTAHQDSIAG 180 MRLGNLYCDP LMVHGGHKIT ARQRWTPTQM QLQILESIFD QGNGTPSKQK IKDITAELSQ 240 HGQISETNVY NWFQNRRARS KRKQAASSLP SNTESEAEGD EDSPTDKKPR SDGSQQQSMA 300 ARAHNPERIS EMHRHFDAAE REQVRGPMYG SGNDSGARPS GGLGQMSFYE NVMSNPRIDQ 360 FFQYRTGESF NMSG

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

AGPRPPPAPP ASPAPSSPPA AHFGPNSRGS SSLPTYLLPQ TAGGKAPYPS CSFLSRVSTA  60
PPQPGFGIGR ADFLPFPRHQ DPILFFLSKN PILPASFLPT AWAPPFLRVS GLTMEWDKAS  120
AAAAAGEPAE ERGEALGYVK VMTDEQMEVL RKQISIYATI CEQLVEMHRA LTAHQDSIAG  180
MRLGNLYCDP LMVHGGHKIT ARQRWTPTQM QLQILESIFD QGNGTPSKQK IKDITAELSQ  240
HGQISETNVY NWFQNRRARS KRKQAASSLP SNTESEAEGD EDSPTDKKPR SDGSQQQSMA  300
ARAHNPERIS EMHRHFDAAE REQVRGPMYG SGNDSGARPS GGLGQMSFYE NVMSNPRIDQ  360
FFQYRTGESF NMSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	256	264	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	2e-60	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG055520.3