PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG042620.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 475aa MW: 50759.5 Da PI: 8.0452

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG042620.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.5	2.4e-13	325	371	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++Pk + K++Ka+ L A+ YI++L+ TRIDC3BG042620.1 325 NHVEAERQRREKLNQRFYALRAVVPKiS------KMDKASLLSDAIAYIQELE 371 799*********************66......**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MSWSDTDAAL FAAVLGHDAA RHLATTPPHL DGPASSSPEL QARLCDLVER GGAWTYGIYW 60 QESRAGAGGR PVLGWGDGHC RDGPAEEARV TDRSLARKRA LLRLHALYGG GDDDGADYAL 120 RLDRVTGVEM YFLASMYFSF HEDAGGPGRA LTSGHHAWAT VDPHLPGSAA APGWYVRASL 180 AQSAGLRTIV FLPCKGGVLE LGSAVAMCEN PEVLRAIQSA FHVEAVAPDD RMRIFGKDVS 240 RSPPLPPVQT TGSDASWALR LGGQAMVATP AKQEVAAVKP KPQQEPPKTI SFSKAVDAQK 300 QAGGEERRPR KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYALRAVVPK ISKMDKASLL 360 SDAIAYIQEL EERLRGGAAG PAPARAETGP SVEVKTMQDE VVLRVSTPLE AHPISGALSA 420 MRDSQLSVVA SSMAVADDTV THTLVVRSAG PERLTAETVL AAISRGMMMS ATPSP

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MSWSDTDAAL FAAVLGHDAA RHLATTPPHL DGPASSSPEL QARLCDLVER GGAWTYGIYW  60
QESRAGAGGR PVLGWGDGHC RDGPAEEARV TDRSLARKRA LLRLHALYGG GDDDGADYAL  120
RLDRVTGVEM YFLASMYFSF HEDAGGPGRA LTSGHHAWAT VDPHLPGSAA APGWYVRASL  180
AQSAGLRTIV FLPCKGGVLE LGSAVAMCEN PEVLRAIQSA FHVEAVAPDD RMRIFGKDVS  240
RSPPLPPVQT TGSDASWALR LGGQAMVATP AKQEVAAVKP KPQQEPPKTI SFSKAVDAQK  300
QAGGEERRPR KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYALRAVVPK ISKMDKASLL  360
SDAIAYIQEL EERLRGGAAG PAPARAETGP SVEVKTMQDE VVLRVSTPLE AHPISGALSA  420
MRDSQLSVVA SSMAVADDTV THTLVVRSAG PERLTAETVL AAISRGMMMS ATPSP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	307	315	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	5e-55	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG042620.1